Release 4.5.13

antbuild/etc/releasenotes.txt

+## 4.5.13 02 June 2019
+
+### Features:
+
+*    Add support for custom tags in obo files. #848
+
+### Bug fixes:
+
+*    Fix OWLLogicalEntity is not an OWLAnnotationProperty #847
+*    Security: Jackson to 2.9.9
+*    Fix Manchester syntax parser crashes on class/property punning #851
+*    Fix OBO parser does not support qualifier block #852
+
 ## 4.5.12 06 May 2019
 
 ### Features:

api/pom.xml

@@ -6,7 +6,7 @@
 	<parent>
 		<groupId>net.sourceforge.owlapi</groupId>
 		<artifactId>owlapi-parent</artifactId>
-		<version>4.5.12</version>
+		<version>4.5.13</version>
 	</parent>
 	<dependencies>
 		<dependency>

api/src/main/java/org/semanticweb/owlapi/util/VersionInfo.java

@@ -32,7 +32,7 @@ public class VersionInfo {
         if (v != null) {
             version = v;
         } else {
-            version = "4.5.12";
+            version = "4.5.13";
         }
     }
 

apibinding/pom.xml

@@ -5,7 +5,7 @@
 	<parent>
 		<groupId>net.sourceforge.owlapi</groupId>
 		<artifactId>owlapi-parent</artifactId>
-		<version>4.5.12</version>
+		<version>4.5.13</version>
 	</parent>
 	<dependencies>
 		<dependency>

compatibility/pom.xml

@@ -6,7 +6,7 @@
 	<parent>
 		<groupId>net.sourceforge.owlapi</groupId>
 		<artifactId>owlapi-parent</artifactId>
-		<version>4.5.12</version>
+		<version>4.5.13</version>
 	</parent>
 	<dependencies>
 		<dependency>

contract/pom.xml

@@ -6,7 +6,7 @@
 	<parent>
 		<groupId>net.sourceforge.owlapi</groupId>
 		<artifactId>owlapi-parent</artifactId>
-		<version>4.5.12</version>
+		<version>4.5.13</version>
 	</parent>
 	<dependencies>
 		<dependency>

contract/src/main/java/uk/ac/manchester/owl/owlapi/PrepareForRelease.java

@@ -11,8 +11,8 @@ import java.util.stream.Collectors;
 
 public class PrepareForRelease {
     public static void main(String[] args) throws IOException {
-        String newVersion = "4.5.12";
-        String[] toReplace = new String[] {"4.5.11", "4.5.11-SNAPSHOT"};
+        String newVersion = "4.5.13";
+        String[] toReplace = new String[] {"4.5.12", "4.5.12-SNAPSHOT"};
         treat(newVersion, toReplace,
             "../api/src/main/java/org/semanticweb/owlapi/util/VersionInfo.java");
         treat(newVersion, toReplace,

distribution/pom.xml

@@ -8,7 +8,7 @@
 	<parent>
 		<groupId>net.sourceforge.owlapi</groupId>
 		<artifactId>owlapi-parent</artifactId>
-		<version>4.5.12</version>
+		<version>4.5.13</version>
 	</parent>
 
 	<properties>

fixers/pom.xml

@@ -6,7 +6,7 @@
 	<parent>
 		<groupId>net.sourceforge.owlapi</groupId>
 		<artifactId>owlapi-parent</artifactId>
-		<version>4.5.12</version>
+		<version>4.5.13</version>
 	</parent>
 	<dependencies>
 		<dependency>

impl/pom.xml

@@ -6,7 +6,7 @@
 	<parent>
 		<groupId>net.sourceforge.owlapi</groupId>
 		<artifactId>owlapi-parent</artifactId>
-		<version>4.5.12</version>
+		<version>4.5.13</version>
 	</parent>
 	<dependencies>
 		<dependency>

oboformat/pom.xml

@@ -5,7 +5,7 @@
 	<parent>
 		<groupId>net.sourceforge.owlapi</groupId>
 		<artifactId>owlapi-parent</artifactId>
-		<version>4.5.12</version>
+		<version>4.5.13</version>
 	</parent>
 	<url>https://github.com/owlcollab/oboformat/</url>
 	<description>A java library for converting obo format documents to OWL, and for converting (a subset of) OWL to obo format. This version has been slightly modified to be included directly in the OWL API.

osgidistribution/pom.xml

@@ -8,7 +8,7 @@
 	<parent>
 		<groupId>net.sourceforge.owlapi</groupId>
 		<artifactId>owlapi-parent</artifactId>
-		<version>4.5.12</version>
+		<version>4.5.13</version>
 	</parent>
 
 	<properties>

osgidistribution/src/test/java/org/semanticweb/owlapi/api/test/VerifyVersionInfoIntegrationTestCase.java

@@ -31,6 +31,6 @@ public class VerifyVersionInfoIntegrationTestCase {
         VersionInfo info = VersionInfo.getVersionInfo();
         assertNotNull("info is null??!!?", info);
         String version = info.getVersion();
-        assertTrue(version.startsWith("4.5.12"));
+        assertTrue(version.startsWith("4.5.13"));
     }
 }

parsers/pom.xml

@@ -6,7 +6,7 @@
 	<parent>
 		<groupId>net.sourceforge.owlapi</groupId>
 		<artifactId>owlapi-parent</artifactId>
-		<version>4.5.12</version>
+		<version>4.5.13</version>
 	</parent>
 	<dependencies>
 		<dependency>

pom.xml

@@ -16,7 +16,7 @@
 	<groupId>net.sourceforge.owlapi</groupId>
 	<artifactId>owlapi-parent</artifactId>
 	<packaging>pom</packaging>
-	<version>4.5.12</version>
+	<version>4.5.13</version>
 	<name>OWLAPI</name>
 	<description>The OWL API is a Java API and reference implementation for creating, manipulating and serialising OWL Ontologies. The latest version of the API is focused towards OWL 2</description>
 	<url>http://owlcs.github.io/owlapi/</url>

rio/pom.xml

@@ -6,7 +6,7 @@
 	<parent>
 		<artifactId>owlapi-parent</artifactId>
 		<groupId>net.sourceforge.owlapi</groupId>
-		<version>4.5.12</version>
+		<version>4.5.13</version>
 	</parent>
 	<artifactId>owlapi-rio</artifactId>
 	<name>OWLAPI :: Sesame Rio module</name>

tools/pom.xml

@@ -6,7 +6,7 @@
 	<parent>
 		<groupId>net.sourceforge.owlapi</groupId>
 		<artifactId>owlapi-parent</artifactId>
-		<version>4.5.12</version>
+		<version>4.5.13</version>
 	</parent>
 	<dependencies>
 		<dependency>